STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_2005AAA ATPase domain-containing protein; Belongs to the ClpA/ClpB family. (897 aa)    
Predicted Functional Partners:
mge1
GrpE; Belongs to the GrpE family.
  
 
 0.917
AV274_0302
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.833
AV274_2662
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 
 0.780
AV274_2339
Hsp70-like protein.
  
 
 0.777
AV274_0164
Hsp70-like protein.
  
 
 0.777
AV274_2700
Cpn10.
  
 
 0.760
AV274_0370
Cpn10; Belongs to the GroES chaperonin family.
  
 
 0.760
AV274_1318
CorA family Mg2+/Co2+ transporter protein.
    
 0.751
AV274_3551
Chaperone protein dnaJ.
  
 
 0.735
AV274_0012
Chaperone protein DnaJ.
  
 
 0.735
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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