STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_0699Glycoside hydrolase. (543 aa)    
Predicted Functional Partners:
AV274_4252
NADH dehydrogenase flavoprotein 2.
    
 0.759
AV274_5202
Glycerol-3-phosphate dehydrogenase.
   
 
  0.701
AV274_6412
NADH dehydrogenase iron-sulfur protein 8.
    
  0.677
AV274_3012
NADH dehydrogenase iron-sulfur protein 8.
    
  0.677
AV274_3227
NADH-ubiquinone oxidoreductase 19.3 kDa subunit; Belongs to the complex I 20 kDa subunit family.
    
  0.666
AV274_1485
Chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 
 0.610
AV274_5463
1,2-diacylglycerol 3-glucosyltransferase.
  
 
 0.610
AV274_5257
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein.
  
 
 0.610
AV274_5582
Transposase.
  
 
 0.610
AV274_5304
Asparagine-linked glycosylation protein 11.
  
 
 0.610
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.