STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_1751Histidyl-tRNA synthetase. (442 aa)    
Predicted Functional Partners:
AV274_6496
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.897
AV274_3068
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.897
AV274_2161
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.897
AV274_0735
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.897
AV274_5591
Aspartyl-tRNA synthetase.
  
  
 0.881
AV274_3508
Tyrosine--tRNA ligase.
  
 
 0.833
AV274_1709
Translation initiation factor eIF-2 gamma subunit.
   
 0.832
AV274_1649
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.831
AV274_0684
Selenocysteine-specific elongation factor.
   
 0.817
AV274_4593
Eukaryotic translation initiation factor 2-alpha kinase.
     
 0.804
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.