STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_1641ABC protein, subfamily ABCG. (672 aa)    
Predicted Functional Partners:
AV274_3996
TapA protein.
    
 0.734
AV274_2665
Uncharacterized protein.
   
 0.734
AV274_6089
Multidrug resistance-associated protein 5.
  
 0.723
AV274_4361
ABC transporter.
  
 0.723
AV274_4360
ABC transporter.
  
 0.723
AV274_3167
ABC transporter.
  
 0.723
AV274_3441
ABC transporter.
  
 0.723
AV274_1862
ABC transporter.
  
 0.723
AV274_1650
ATP-binding cassette, sub-family C.
  
 0.723
AV274_1241
ABC transporter C family member 2.
  
 0.723
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.