Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0853 | AV274_0926 | A0A196SMD1 | A0A196SNB5 | RNA-binding proteins (RRM domain). | Small nuclear ribonucleoprotein G. | 0.911 |
AV274_0853 | AV274_2112 | A0A196SMD1 | A0A196SIN4 | RNA-binding proteins (RRM domain). | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.910 |
AV274_0853 | AV274_2337 | A0A196SMD1 | A0A196SFY9 | RNA-binding proteins (RRM domain). | Eukaryotic translation initiation factor eIF-4F. | 0.887 |
AV274_0853 | AV274_3422 | A0A196SMD1 | A0A196SD27 | RNA-binding proteins (RRM domain). | MIF4G_like domain-containing protein. | 0.897 |
AV274_0853 | AV274_3816 | A0A196SMD1 | A0A196SBX1 | RNA-binding proteins (RRM domain). | U1 small nuclear ribonucleoprotein 70 kDa-like protein. | 0.915 |
AV274_0853 | AV274_5293 | A0A196SMD1 | A0A196S7H0 | RNA-binding proteins (RRM domain). | Cleavage stimulation factor. | 0.881 |
AV274_0853 | AV274_5781 | A0A196SMD1 | A0A196S640 | RNA-binding proteins (RRM domain). | Zinc finger protein. | 0.891 |
AV274_0853 | AV274_6078 | A0A196SMD1 | A0A196S5A3 | RNA-binding proteins (RRM domain). | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.910 |
AV274_0853 | AV274_6287 | A0A196SMD1 | A0A196S4P5 | RNA-binding proteins (RRM domain). | Nuclear cap-binding protein subunit 2. | 0.920 |
AV274_0853 | AV274_6358 | A0A196SMD1 | A0A196S7K2 | RNA-binding proteins (RRM domain). | Pre-mRNA-processing factor 17. | 0.882 |
AV274_0926 | AV274_0853 | A0A196SNB5 | A0A196SMD1 | Small nuclear ribonucleoprotein G. | RNA-binding proteins (RRM domain). | 0.911 |
AV274_0926 | AV274_2112 | A0A196SNB5 | A0A196SIN4 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.999 |
AV274_0926 | AV274_3422 | A0A196SNB5 | A0A196SD27 | Small nuclear ribonucleoprotein G. | MIF4G_like domain-containing protein. | 0.998 |
AV274_0926 | AV274_3816 | A0A196SNB5 | A0A196SBX1 | Small nuclear ribonucleoprotein G. | U1 small nuclear ribonucleoprotein 70 kDa-like protein. | 0.999 |
AV274_0926 | AV274_5293 | A0A196SNB5 | A0A196S7H0 | Small nuclear ribonucleoprotein G. | Cleavage stimulation factor. | 0.957 |
AV274_0926 | AV274_5781 | A0A196SNB5 | A0A196S640 | Small nuclear ribonucleoprotein G. | Zinc finger protein. | 0.999 |
AV274_0926 | AV274_6078 | A0A196SNB5 | A0A196S5A3 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
AV274_0926 | AV274_6287 | A0A196SNB5 | A0A196S4P5 | Small nuclear ribonucleoprotein G. | Nuclear cap-binding protein subunit 2. | 0.998 |
AV274_0926 | AV274_6358 | A0A196SNB5 | A0A196S7K2 | Small nuclear ribonucleoprotein G. | Pre-mRNA-processing factor 17. | 0.997 |
AV274_2112 | AV274_0853 | A0A196SIN4 | A0A196SMD1 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | RNA-binding proteins (RRM domain). | 0.910 |
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