Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0383 | AV274_0596 | A0A196SLI8 | A0A196SPA9 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | Isopentenyl-diphosphate Delta-isomerase. | 0.889 |
AV274_0383 | AV274_1506 | A0A196SLI8 | A0A196SKC9 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. | 0.915 |
AV274_0383 | AV274_2410 | A0A196SLI8 | A0A196SHV3 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | Alkyl transferase; Belongs to the UPP synthase family. | 0.504 |
AV274_0383 | AV274_3252 | A0A196SLI8 | A0A196SAG3 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. | 0.412 |
AV274_0383 | AV274_4510 | A0A196SLI8 | A0A196S9U9 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6-like protein. | 0.540 |
AV274_0383 | AV274_5196 | A0A196SLI8 | A0A196S7U9 | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | Phosphoserine phosphatase. | 0.571 |
AV274_0596 | AV274_0383 | A0A196SPA9 | A0A196SLI8 | Isopentenyl-diphosphate Delta-isomerase. | tRNA isopentenyltransferase; Belongs to the IPP transferase family. | 0.889 |
AV274_0596 | AV274_0885 | A0A196SPA9 | A0A196SJZ0 | Isopentenyl-diphosphate Delta-isomerase. | DJ-1_PfpI domain-containing protein. | 0.750 |
AV274_0596 | AV274_1506 | A0A196SPA9 | A0A196SKC9 | Isopentenyl-diphosphate Delta-isomerase. | Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. | 0.931 |
AV274_0596 | AV274_1514 | A0A196SPA9 | A0A196SLH2 | Isopentenyl-diphosphate Delta-isomerase. | Mevalonate kinase. | 0.802 |
AV274_0596 | AV274_2410 | A0A196SPA9 | A0A196SHV3 | Isopentenyl-diphosphate Delta-isomerase. | Alkyl transferase; Belongs to the UPP synthase family. | 0.914 |
AV274_0596 | AV274_3252 | A0A196SPA9 | A0A196SAG3 | Isopentenyl-diphosphate Delta-isomerase. | Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. | 0.786 |
AV274_0596 | AV274_4510 | A0A196SPA9 | A0A196S9U9 | Isopentenyl-diphosphate Delta-isomerase. | NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6-like protein. | 0.947 |
AV274_0596 | AV274_4661 | A0A196SPA9 | A0A196SBJ1 | Isopentenyl-diphosphate Delta-isomerase. | Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. | 0.964 |
AV274_0596 | AV274_5196 | A0A196SPA9 | A0A196S7U9 | Isopentenyl-diphosphate Delta-isomerase. | Phosphoserine phosphatase. | 0.784 |
AV274_0596 | AV274_6369 | A0A196SPA9 | A0A196S4B2 | Isopentenyl-diphosphate Delta-isomerase. | RNA binding protein. | 0.751 |
AV274_0885 | AV274_0596 | A0A196SJZ0 | A0A196SPA9 | DJ-1_PfpI domain-containing protein. | Isopentenyl-diphosphate Delta-isomerase. | 0.750 |
AV274_0885 | AV274_1506 | A0A196SJZ0 | A0A196SKC9 | DJ-1_PfpI domain-containing protein. | Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. | 0.768 |
AV274_0885 | AV274_2410 | A0A196SJZ0 | A0A196SHV3 | DJ-1_PfpI domain-containing protein. | Alkyl transferase; Belongs to the UPP synthase family. | 0.604 |
AV274_0885 | AV274_4661 | A0A196SJZ0 | A0A196SBJ1 | DJ-1_PfpI domain-containing protein. | Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. | 0.475 |
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