Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB45159.1 | SEB45192.1 | SAMN04490203_0243 | SAMN04490203_0244 | Alginate biosynthesis sensor protein KinB. | Two-component response regulator AlgB. | 0.959 |
SEB45159.1 | SEB49315.1 | SAMN04490203_0243 | SAMN04490203_0394 | Alginate biosynthesis sensor protein KinB. | Chemotaxis protein histidine kinase CheA. | 0.833 |
SEB45159.1 | SEB82752.1 | SAMN04490203_0243 | SAMN04490203_1251 | Alginate biosynthesis sensor protein KinB. | Na+/proline symporter. | 0.905 |
SEB45159.1 | SEB89354.1 | SAMN04490203_0243 | SAMN04490203_1391 | Alginate biosynthesis sensor protein KinB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.935 |
SEB45159.1 | SEC32284.1 | SAMN04490203_0243 | SAMN04490203_2199 | Alginate biosynthesis sensor protein KinB. | Signal transduction histidine kinase. | 0.950 |
SEB45159.1 | SEC36159.1 | SAMN04490203_0243 | SAMN04490203_2269 | Alginate biosynthesis sensor protein KinB. | PAS fold-containing protein. | 0.947 |
SEB45159.1 | SEC86339.1 | SAMN04490203_0243 | SAMN04490203_3271 | Alginate biosynthesis sensor protein KinB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.930 |
SEB45159.1 | SED03518.1 | SAMN04490203_0243 | SAMN04490203_3661 | Alginate biosynthesis sensor protein KinB. | Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. | 0.840 |
SEB45159.1 | SED04040.1 | SAMN04490203_0243 | SAMN04490203_3674 | Alginate biosynthesis sensor protein KinB. | PAS domain S-box-containing protein. | 0.910 |
SEB45159.1 | SED14020.1 | SAMN04490203_0243 | SAMN04490203_3904 | Alginate biosynthesis sensor protein KinB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.934 |
SEB45192.1 | SEB45159.1 | SAMN04490203_0244 | SAMN04490203_0243 | Two-component response regulator AlgB. | Alginate biosynthesis sensor protein KinB. | 0.959 |
SEB45192.1 | SEB49315.1 | SAMN04490203_0244 | SAMN04490203_0394 | Two-component response regulator AlgB. | Chemotaxis protein histidine kinase CheA. | 0.872 |
SEB45192.1 | SEB82752.1 | SAMN04490203_0244 | SAMN04490203_1251 | Two-component response regulator AlgB. | Na+/proline symporter. | 0.884 |
SEB45192.1 | SEB89354.1 | SAMN04490203_0244 | SAMN04490203_1391 | Two-component response regulator AlgB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.895 |
SEB45192.1 | SEC32284.1 | SAMN04490203_0244 | SAMN04490203_2199 | Two-component response regulator AlgB. | Signal transduction histidine kinase. | 0.899 |
SEB45192.1 | SEC36159.1 | SAMN04490203_0244 | SAMN04490203_2269 | Two-component response regulator AlgB. | PAS fold-containing protein. | 0.938 |
SEB45192.1 | SEC86339.1 | SAMN04490203_0244 | SAMN04490203_3271 | Two-component response regulator AlgB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.883 |
SEB45192.1 | SED03518.1 | SAMN04490203_0244 | SAMN04490203_3661 | Two-component response regulator AlgB. | Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. | 0.872 |
SEB45192.1 | SED04040.1 | SAMN04490203_0244 | SAMN04490203_3674 | Two-component response regulator AlgB. | PAS domain S-box-containing protein. | 0.881 |
SEB45192.1 | SED14020.1 | SAMN04490203_0244 | SAMN04490203_3904 | Two-component response regulator AlgB. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.881 |
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