Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB49202.1 | SEB49231.1 | SAMN04490203_0390 | SAMN04490203_0391 | Twitching motility two-component system response regulator PilG. | Twitching motility two-component system response regulator PilH. | 0.900 |
SEB49202.1 | SEB49257.1 | SAMN04490203_0390 | SAMN04490203_0392 | Twitching motility two-component system response regulator PilG. | Twitching motility protein PilI. | 0.980 |
SEB49202.1 | SEB49283.1 | SAMN04490203_0390 | SAMN04490203_0393 | Twitching motility two-component system response regulator PilG. | Twitching motility protein PilJ. | 0.973 |
SEB49202.1 | SEB49315.1 | SAMN04490203_0390 | SAMN04490203_0394 | Twitching motility two-component system response regulator PilG. | Chemotaxis protein histidine kinase CheA. | 0.892 |
SEB49202.1 | SEB49339.1 | SAMN04490203_0390 | SAMN04490203_0395 | Twitching motility two-component system response regulator PilG. | Chemosensory pili system protein ChpC. | 0.948 |
SEB49202.1 | SEB89354.1 | SAMN04490203_0390 | SAMN04490203_1391 | Twitching motility two-component system response regulator PilG. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.984 |
SEB49202.1 | SEC32284.1 | SAMN04490203_0390 | SAMN04490203_2199 | Twitching motility two-component system response regulator PilG. | Signal transduction histidine kinase. | 0.910 |
SEB49202.1 | SEC36159.1 | SAMN04490203_0390 | SAMN04490203_2269 | Twitching motility two-component system response regulator PilG. | PAS fold-containing protein. | 0.985 |
SEB49202.1 | SED03518.1 | SAMN04490203_0390 | SAMN04490203_3661 | Twitching motility two-component system response regulator PilG. | Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. | 0.796 |
SEB49202.1 | SED04040.1 | SAMN04490203_0390 | SAMN04490203_3674 | Twitching motility two-component system response regulator PilG. | PAS domain S-box-containing protein. | 0.981 |
SEB49231.1 | SEB49202.1 | SAMN04490203_0391 | SAMN04490203_0390 | Twitching motility two-component system response regulator PilH. | Twitching motility two-component system response regulator PilG. | 0.900 |
SEB49231.1 | SEB49257.1 | SAMN04490203_0391 | SAMN04490203_0392 | Twitching motility two-component system response regulator PilH. | Twitching motility protein PilI. | 0.984 |
SEB49231.1 | SEB49283.1 | SAMN04490203_0391 | SAMN04490203_0393 | Twitching motility two-component system response regulator PilH. | Twitching motility protein PilJ. | 0.977 |
SEB49231.1 | SEB49315.1 | SAMN04490203_0391 | SAMN04490203_0394 | Twitching motility two-component system response regulator PilH. | Chemotaxis protein histidine kinase CheA. | 0.916 |
SEB49231.1 | SEB49339.1 | SAMN04490203_0391 | SAMN04490203_0395 | Twitching motility two-component system response regulator PilH. | Chemosensory pili system protein ChpC. | 0.948 |
SEB49231.1 | SEB89354.1 | SAMN04490203_0391 | SAMN04490203_1391 | Twitching motility two-component system response regulator PilH. | Two-component system, NarL family, sensor histidine kinase EvgS. | 0.988 |
SEB49231.1 | SEC32284.1 | SAMN04490203_0391 | SAMN04490203_2199 | Twitching motility two-component system response regulator PilH. | Signal transduction histidine kinase. | 0.910 |
SEB49231.1 | SEC36159.1 | SAMN04490203_0391 | SAMN04490203_2269 | Twitching motility two-component system response regulator PilH. | PAS fold-containing protein. | 0.987 |
SEB49231.1 | SED03518.1 | SAMN04490203_0391 | SAMN04490203_3661 | Twitching motility two-component system response regulator PilH. | Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE. | 0.803 |
SEB49231.1 | SED04040.1 | SAMN04490203_0391 | SAMN04490203_3674 | Twitching motility two-component system response regulator PilH. | PAS domain S-box-containing protein. | 0.981 |
page 1 of 6