Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB62715.1 | SEB62755.1 | SAMN04490203_0826 | SAMN04490203_0827 | Hypothetical protein. | Phosphonoacetate hydrolase. | 0.437 |
SEB62715.1 | SEB62799.1 | SAMN04490203_0826 | SAMN04490203_0828 | Hypothetical protein. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.439 |
SEB62715.1 | SEB72475.1 | SAMN04490203_0826 | SAMN04490203_1039 | Hypothetical protein. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.587 |
SEB62715.1 | SEC07113.1 | SAMN04490203_0826 | SAMN04490203_1737 | Hypothetical protein. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.587 |
SEB62715.1 | SED09688.1 | SAMN04490203_0826 | SAMN04490203_3806 | Hypothetical protein. | Zinc transporter, ZIP family. | 0.622 |
SEB62715.1 | SED09735.1 | SAMN04490203_0826 | SAMN04490203_3807 | Hypothetical protein. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.751 |
SEB62715.1 | SED09778.1 | SAMN04490203_0826 | SAMN04490203_3808 | Hypothetical protein. | Hypothetical protein. | 0.752 |
SEB62715.1 | SED09865.1 | SAMN04490203_0826 | SAMN04490203_3810 | Hypothetical protein. | Hypothetical protein. | 0.750 |
SEB62755.1 | SEB62715.1 | SAMN04490203_0827 | SAMN04490203_0826 | Phosphonoacetate hydrolase. | Hypothetical protein. | 0.437 |
SEB62755.1 | SEB62799.1 | SAMN04490203_0827 | SAMN04490203_0828 | Phosphonoacetate hydrolase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.491 |
SEB62799.1 | SEB62715.1 | SAMN04490203_0828 | SAMN04490203_0826 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.439 |
SEB62799.1 | SEB62755.1 | SAMN04490203_0828 | SAMN04490203_0827 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Phosphonoacetate hydrolase. | 0.491 |
SEB72475.1 | SEB62715.1 | SAMN04490203_1039 | SAMN04490203_0826 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Hypothetical protein. | 0.587 |
SEB72475.1 | SED09688.1 | SAMN04490203_1039 | SAMN04490203_3806 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Zinc transporter, ZIP family. | 0.519 |
SEB72475.1 | SED09735.1 | SAMN04490203_1039 | SAMN04490203_3807 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.650 |
SEB72475.1 | SED09778.1 | SAMN04490203_1039 | SAMN04490203_3808 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Hypothetical protein. | 0.652 |
SEC07113.1 | SEB62715.1 | SAMN04490203_1737 | SAMN04490203_0826 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Hypothetical protein. | 0.587 |
SEC07113.1 | SED09688.1 | SAMN04490203_1737 | SAMN04490203_3806 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Zinc transporter, ZIP family. | 0.519 |
SEC07113.1 | SED09735.1 | SAMN04490203_1737 | SAMN04490203_3807 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.650 |
SEC07113.1 | SED09778.1 | SAMN04490203_1737 | SAMN04490203_3808 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Hypothetical protein. | 0.652 |
page 1 of 3