Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB51340.1 | SEB71422.1 | SAMN04490203_0470 | SAMN04490203_1017 | Acetyltransferase (GNAT) domain-containing protein. | Hypothetical protein. | 0.504 |
SEB51340.1 | SEC40973.1 | SAMN04490203_0470 | SAMN04490203_2360 | Acetyltransferase (GNAT) domain-containing protein. | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | 0.608 |
SEB71333.1 | SEB71422.1 | SAMN04490203_1015 | SAMN04490203_1017 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Hypothetical protein. | 0.576 |
SEB71333.1 | SEB71473.1 | SAMN04490203_1015 | SAMN04490203_1018 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Hypothetical protein. | 0.435 |
SEB71333.1 | xseA | SAMN04490203_1015 | SAMN04490203_1016 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.751 |
SEB71422.1 | SEB51340.1 | SAMN04490203_1017 | SAMN04490203_0470 | Hypothetical protein. | Acetyltransferase (GNAT) domain-containing protein. | 0.504 |
SEB71422.1 | SEB71333.1 | SAMN04490203_1017 | SAMN04490203_1015 | Hypothetical protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.576 |
SEB71422.1 | SEB71473.1 | SAMN04490203_1017 | SAMN04490203_1018 | Hypothetical protein. | Hypothetical protein. | 0.564 |
SEB71422.1 | SEC40973.1 | SAMN04490203_1017 | SAMN04490203_2360 | Hypothetical protein. | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | 0.416 |
SEB71422.1 | SEC52552.1 | SAMN04490203_1017 | SAMN04490203_2580 | Hypothetical protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.470 |
SEB71422.1 | SEC63573.1 | SAMN04490203_1017 | SAMN04490203_2798 | Hypothetical protein. | Hypothetical protein. | 0.459 |
SEB71422.1 | xseA | SAMN04490203_1017 | SAMN04490203_1016 | Hypothetical protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.608 |
SEB71473.1 | SEB71333.1 | SAMN04490203_1018 | SAMN04490203_1015 | Hypothetical protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.435 |
SEB71473.1 | SEB71422.1 | SAMN04490203_1018 | SAMN04490203_1017 | Hypothetical protein. | Hypothetical protein. | 0.564 |
SEB71473.1 | xseA | SAMN04490203_1018 | SAMN04490203_1016 | Hypothetical protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.453 |
SEC40973.1 | SEB51340.1 | SAMN04490203_2360 | SAMN04490203_0470 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | Acetyltransferase (GNAT) domain-containing protein. | 0.608 |
SEC40973.1 | SEB71422.1 | SAMN04490203_2360 | SAMN04490203_1017 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | Hypothetical protein. | 0.416 |
SEC52552.1 | SEB71422.1 | SAMN04490203_2580 | SAMN04490203_1017 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.470 |
SEC52552.1 | SEC63573.1 | SAMN04490203_2580 | SAMN04490203_2798 | Outer membrane autotransporter barrel domain-containing protein. | Hypothetical protein. | 0.647 |
SEC63573.1 | SEB71422.1 | SAMN04490203_2798 | SAMN04490203_1017 | Hypothetical protein. | Hypothetical protein. | 0.459 |
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