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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sprTSprT protein; Belongs to the SprT family. (164 aa)    
Predicted Functional Partners:
SEC92396.1
Hypothetical protein.
  
     0.593
SEC92090.1
Protein of unknown function.
  
     0.578
SED05684.1
Nucleoid-associated protein.
  
     0.554
SEB50406.1
TIGR01666 family membrane protein.
  
     0.539
SED61055.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
     0.534
SEB51815.1
Protein of unknown function VcgC/VcgE.
  
     0.533
SEB59881.1
H-NS histone family protein.
  
     0.510
SEB80363.1
Protein of unknown function.
       0.504
SEC38025.1
Hypothetical protein.
  
     0.492
SEC07479.1
acyl-CoA thioester hydrolase.
 
     0.464
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.