STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC16965.1Amino acid ABC transporter substrate-binding protein, PAAT family. (253 aa)    
Predicted Functional Partners:
SEC17028.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.996
SED68894.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.915
SED68852.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.881
SEC67380.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.880
SEC58710.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.875
SED65858.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.873
SEC56354.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.864
SEB60581.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.863
SEB60620.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  0.863
SEB60652.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
  0.847
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.