STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC83992.1Glutamine amidotransferase. (258 aa)    
Predicted Functional Partners:
SEC58190.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
 0.827
SEC83949.1
Protein of unknown function.
  
    0.816
SEC84049.1
Hypothetical protein.
       0.697
SEC97850.1
Selenocysteine lyase/Cysteine desulfurase.
  
 
 0.594
SED02259.1
Cysteine sulfinate desulfinase.
  
 
 0.594
SEC84112.1
Oligopeptidase B Serine peptidase. MEROPS family S09A.
       0.536
SEC83860.1
Sensor histidine kinase inhibitor, KipI family.
       0.526
pxpA-2
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.525
SEC83807.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
       0.503
SEB59226.1
Protein of unknown function.
  
     0.439
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
Server load: low (22%) [HD]