Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB59226.1 | SEC83992.1 | SAMN04490203_0733 | SAMN04490203_3223 | Protein of unknown function. | Glutamine amidotransferase. | 0.439 |
SEC58190.1 | SEC83992.1 | SAMN04490203_2690 | SAMN04490203_3223 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Glutamine amidotransferase. | 0.827 |
SEC58190.1 | SEC97850.1 | SAMN04490203_2690 | SAMN04490203_3522 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Selenocysteine lyase/Cysteine desulfurase. | 0.817 |
SEC83807.1 | SEC83860.1 | SAMN04490203_3219 | SAMN04490203_3220 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Sensor histidine kinase inhibitor, KipI family. | 0.999 |
SEC83807.1 | SEC83949.1 | SAMN04490203_3219 | SAMN04490203_3222 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Protein of unknown function. | 0.510 |
SEC83807.1 | SEC83992.1 | SAMN04490203_3219 | SAMN04490203_3223 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Glutamine amidotransferase. | 0.503 |
SEC83807.1 | SEC84049.1 | SAMN04490203_3219 | SAMN04490203_3224 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Hypothetical protein. | 0.442 |
SEC83807.1 | pxpA-2 | SAMN04490203_3219 | SAMN04490203_3221 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.992 |
SEC83860.1 | SEC83807.1 | SAMN04490203_3220 | SAMN04490203_3219 | Sensor histidine kinase inhibitor, KipI family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.999 |
SEC83860.1 | SEC83949.1 | SAMN04490203_3220 | SAMN04490203_3222 | Sensor histidine kinase inhibitor, KipI family. | Protein of unknown function. | 0.534 |
SEC83860.1 | SEC83992.1 | SAMN04490203_3220 | SAMN04490203_3223 | Sensor histidine kinase inhibitor, KipI family. | Glutamine amidotransferase. | 0.526 |
SEC83860.1 | SEC84049.1 | SAMN04490203_3220 | SAMN04490203_3224 | Sensor histidine kinase inhibitor, KipI family. | Hypothetical protein. | 0.473 |
SEC83860.1 | pxpA-2 | SAMN04490203_3220 | SAMN04490203_3221 | Sensor histidine kinase inhibitor, KipI family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.997 |
SEC83949.1 | SEC83807.1 | SAMN04490203_3222 | SAMN04490203_3219 | Protein of unknown function. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.510 |
SEC83949.1 | SEC83860.1 | SAMN04490203_3222 | SAMN04490203_3220 | Protein of unknown function. | Sensor histidine kinase inhibitor, KipI family. | 0.534 |
SEC83949.1 | SEC83992.1 | SAMN04490203_3222 | SAMN04490203_3223 | Protein of unknown function. | Glutamine amidotransferase. | 0.816 |
SEC83949.1 | SEC84049.1 | SAMN04490203_3222 | SAMN04490203_3224 | Protein of unknown function. | Hypothetical protein. | 0.674 |
SEC83949.1 | SEC84112.1 | SAMN04490203_3222 | SAMN04490203_3225 | Protein of unknown function. | Oligopeptidase B Serine peptidase. MEROPS family S09A. | 0.527 |
SEC83949.1 | pxpA-2 | SAMN04490203_3222 | SAMN04490203_3221 | Protein of unknown function. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.533 |
SEC83992.1 | SEB59226.1 | SAMN04490203_3223 | SAMN04490203_0733 | Glutamine amidotransferase. | Protein of unknown function. | 0.439 |
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