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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC84445.1Protein of unknown function. (272 aa)    
Predicted Functional Partners:
SED01574.1
Periplasmic chaperone for outer membrane proteins Skp.
 
 
 0.844
SEB81298.1
Protein of unknown function.
 
 
 0.802
SEB84691.1
Hypothetical protein.
  
     0.773
SEB90673.1
Hypothetical protein.
  
     0.763
SED02503.1
Hypothetical protein.
  
     0.761
SEB42850.1
Hypothetical protein.
  
     0.756
SEB80514.1
Uncharacterized membrane protein.
  
     0.754
SED10092.1
TIGR02099 family protein.
  
     0.751
SEB66777.1
Hypothetical protein.
  
     0.747
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.747
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.