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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC92986.1Hemoglobin/transferrin/lactoferrin receptor protein. (838 aa)    
Predicted Functional Partners:
SEC92947.1
FecR family protein.
 
  
 0.840
SEB44014.1
Protein TonB.
 
 
 0.813
SEC55835.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.810
SEC91015.1
Cell division and transport-associated protein TolA.
  
 
 0.784
SEB49148.1
Protein TonB.
  
 
 0.775
SEC92915.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.761
SEB69245.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
 
  
 0.708
SED69277.1
FecR family protein.
 
  
 0.703
SEC60305.1
FecR family protein.
 
  
 0.684
SEC98696.1
FecR family protein.
 
    0.670
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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