STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED00995.1S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. (370 aa)    
Predicted Functional Partners:
SED00953.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
SEC92780.1
Alcohol dehydrogenase.
   
 0.988
SEB87193.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 
0.970
SEC55311.1
Acyl transferase domain-containing protein.
  
 
 0.837
SEC21355.1
Quinohemoprotein ethanol dehydrogenase.
    
 0.814
SEC10245.1
Uncharacterized conserved protein.
 
  
 0.806
SEC62722.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
 0.794
SEC92677.1
NAD(P)H-flavin reductase.
  
 
 0.794
SED71157.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.794
SEC24087.1
Fatty acid desaturase.
    
 0.787
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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