STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED04115.1Homoserine dehydrogenase. (434 aa)    
Predicted Functional Partners:
SED04076.1
L-threonine synthase.
 
 0.999
SEB79686.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
  
 0.991
SEB93537.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
  
 0.991
SEC43244.1
Acetolactate synthase, large subunit; Belongs to the TPP enzyme family.
  
 0.991
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 0.991
SEC69343.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
 0.991
SED14886.1
Acetolactate synthase, large subunit.
  
 0.991
SEC79502.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.990
SEC57587.1
Aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 0.989
SEC95780.1
Aspartate kinase; Belongs to the aspartokinase family.
 0.989
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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