STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED05811.1Ketosteroid isomerase-related protein. (156 aa)    
Predicted Functional Partners:
SED05767.1
Putative endonuclease.
       0.800
SEC77656.1
Phenazine biosynthesis protein PhzF family.
  
 
 0.722
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
  
 
 0.716
SED05853.1
MFS transporter, CP family, cyanate transporter.
       0.631
SED05899.1
DNA-binding transcriptional regulator, FadR family.
       0.617
SEB71789.1
Uncharacterized membrane protein YhhN.
  
     0.556
SED00268.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
  
  0.484
SEC30478.1
SnoaL-like domain-containing protein.
    
 0.458
SEC40254.1
Conserved hypothetical protein.
    
 0.458
SEC51124.1
SnoaL-like domain-containing protein.
    
 0.458
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.