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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED06114.1Amino acid ABC transporter membrane protein 1, PAAT family. (393 aa)    
Predicted Functional Partners:
SED06067.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
0.998
glnQ-2
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.997
SED06150.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 
 0.996
SEC58710.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
0.903
SEB73229.1
L-glutamate ABC transporter membrane protein.
 
0.889
glnQ
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.867
SED65809.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.810
SEB73181.1
L-glutamate ABC transporter ATP-binding protein.
 
 
 0.783
SED65858.1
Amino acid ABC transporter membrane protein, PAAT family.
 
 
0.735
SEB60581.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
0.714
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.