Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB45892.1 | SED15993.1 | SAMN04490203_0269 | SAMN04490203_3954 | Hypothetical protein. | Uncharacterized protein involved in outer membrane biogenesis. | 0.554 |
SEB51815.1 | SEB75114.1 | SAMN04490203_0486 | SAMN04490203_1094 | Protein of unknown function VcgC/VcgE. | Beta-galactosidase. | 0.654 |
SEB51815.1 | SEC95609.1 | SAMN04490203_0486 | SAMN04490203_3470 | Protein of unknown function VcgC/VcgE. | Arc-like DNA binding domain-containing protein. | 0.631 |
SEB51815.1 | SED15993.1 | SAMN04490203_0486 | SAMN04490203_3954 | Protein of unknown function VcgC/VcgE. | Uncharacterized protein involved in outer membrane biogenesis. | 0.664 |
SEB75114.1 | SEB51815.1 | SAMN04490203_1094 | SAMN04490203_0486 | Beta-galactosidase. | Protein of unknown function VcgC/VcgE. | 0.654 |
SEB75114.1 | SEB78734.1 | SAMN04490203_1094 | SAMN04490203_1171 | Beta-galactosidase. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.628 |
SEB75114.1 | SEB94786.1 | SAMN04490203_1094 | SAMN04490203_1496 | Beta-galactosidase. | Membrane-bound lytic murein transglycosylase MltF. | 0.467 |
SEB75114.1 | SEC00084.1 | SAMN04490203_1094 | SAMN04490203_1598 | Beta-galactosidase. | Type II and III secretion system protein. | 0.519 |
SEB75114.1 | SEC95609.1 | SAMN04490203_1094 | SAMN04490203_3470 | Beta-galactosidase. | Arc-like DNA binding domain-containing protein. | 0.762 |
SEB75114.1 | SED15993.1 | SAMN04490203_1094 | SAMN04490203_3954 | Beta-galactosidase. | Uncharacterized protein involved in outer membrane biogenesis. | 0.481 |
SEB75114.1 | SED67140.1 | SAMN04490203_1094 | SAMN04490203_4414 | Beta-galactosidase. | SmpA / OmlA family protein. | 0.430 |
SEB78734.1 | SEB75114.1 | SAMN04490203_1171 | SAMN04490203_1094 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Beta-galactosidase. | 0.628 |
SEB78734.1 | SEC00084.1 | SAMN04490203_1171 | SAMN04490203_1598 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Type II and III secretion system protein. | 0.735 |
SEB78734.1 | SEC95609.1 | SAMN04490203_1171 | SAMN04490203_3470 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Arc-like DNA binding domain-containing protein. | 0.740 |
SEB78734.1 | SED15993.1 | SAMN04490203_1171 | SAMN04490203_3954 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Uncharacterized protein involved in outer membrane biogenesis. | 0.515 |
SEB78734.1 | SED67140.1 | SAMN04490203_1171 | SAMN04490203_4414 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | SmpA / OmlA family protein. | 0.535 |
SEB94786.1 | SEB75114.1 | SAMN04490203_1496 | SAMN04490203_1094 | Membrane-bound lytic murein transglycosylase MltF. | Beta-galactosidase. | 0.467 |
SEB94786.1 | SEC95609.1 | SAMN04490203_1496 | SAMN04490203_3470 | Membrane-bound lytic murein transglycosylase MltF. | Arc-like DNA binding domain-containing protein. | 0.515 |
SEB94786.1 | SED15993.1 | SAMN04490203_1496 | SAMN04490203_3954 | Membrane-bound lytic murein transglycosylase MltF. | Uncharacterized protein involved in outer membrane biogenesis. | 0.462 |
SEB94786.1 | SED67140.1 | SAMN04490203_1496 | SAMN04490203_4414 | Membrane-bound lytic murein transglycosylase MltF. | SmpA / OmlA family protein. | 0.577 |
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