STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED70463.1iron(III) transport system substrate-binding protein. (333 aa)    
Predicted Functional Partners:
SED70411.1
iron(III) transport system permease protein.
 
 
 0.970
SED58824.1
iron(III) transport system permease protein.
 
 
 0.942
SEB73624.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.896
SEB79043.1
Putative iron-regulated protein.
  
    0.830
SEB47625.1
iron(III) transport system permease protein.
 
 
 0.818
SEB47601.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.679
SEB78431.1
Hypothetical protein.
   
    0.673
SEC32284.1
Signal transduction histidine kinase.
    
 0.617
SED08286.1
Thioredoxin reductase (NADPH).
   
  
 0.581
SED58777.1
iron(III) transport system substrate-binding protein.
  
  
 
0.580
Your Current Organism:
Pseudomonas taetrolens
NCBI taxonomy Id: 47884
Other names: ATCC 4683, CCUG 560, CFBP 5592, CIP 103299, JCM 20238, LMG 2336, LMG:2336, NCIB 9396, NCIB:9396, NCTC 10697, NRRL B-14, NRRL B-731, NRRL:B:14, NRRL:B:731, P. taetrolens, VKM B-904, VKM:B:904
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