STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALZ83419.1Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
ALZ84696.1
Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.828
ALZ84704.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.828
ALZ84718.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.811
ALZ84697.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.782
ALZ84699.1
Head completion/stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.775
ALZ84695.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.742
ALZ84694.1
Presumed portal vertex protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.737
ALZ84705.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.719
ALZ84698.1
Terminase; gpM; M protein; capsid packaging; M protein is probably the endonuclease subunit of the terminase complex, which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends; Q, P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.677
ALZ84716.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.677
Your Current Organism:
Pseudomonas oryzihabitans
NCBI taxonomy Id: 47885
Other names: AJ 2197, ATCC 43272, CCUG 12540, CIP 102996, DSM 6835, Flavimonas oryzihabitans, JCM 2952, LMG 7040, LMG:7040, NBRC 102199, P. oryzihabitans, group Ve-2, strain KS0036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.