STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALZ83895.1Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
gnd
6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.944
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.944
ALZ86007.1
Gluconate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.914
ALZ86582.1
Gluconate 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.909
ALZ82862.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
ALZ83708.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
ALZ84115.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
ALZ84941.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
ALZ85335.1
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
Your Current Organism:
Pseudomonas oryzihabitans
NCBI taxonomy Id: 47885
Other names: AJ 2197, ATCC 43272, CCUG 12540, CIP 102996, DSM 6835, Flavimonas oryzihabitans, JCM 2952, LMG 7040, LMG:7040, NBRC 102199, P. oryzihabitans, group Ve-2, strain KS0036
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