STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALZ84917.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.722
modC
Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
  
  
 0.612
ALZ84950.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.541
cysT
Sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.541
ALZ84916.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.532
ALZ84915.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
ALZ85621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
ALZ84887.1
Malonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
ALZ86148.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
ALZ84886.1
Malonate carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
Your Current Organism:
Pseudomonas oryzihabitans
NCBI taxonomy Id: 47885
Other names: AJ 2197, ATCC 43272, CCUG 12540, CIP 102996, DSM 6835, Flavimonas oryzihabitans, JCM 2952, LMG 7040, LMG:7040, NBRC 102199, P. oryzihabitans, group Ve-2, strain KS0036
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