STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10006268Uncharacterized protein. (722 aa)    
Predicted Functional Partners:
AM587_10005186
Calcium homeostasis endoplasmic reticulum protein.
    
 0.754
AM587_10011658
Adenylate kinase 9.
    
  0.586
AM587_10005327
Pre-mRNA-splicing factor ini1.
    
  0.572
AM587_10007103
Receptor-type tyrosine-protein phosphatase delta.
    
  0.565
AM587_10011989
Small nuclear ribonucleoprotein Sm D3.
    
 0.561
AM587_10013336
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.558
AM587_10017585
Serine/threonine-protein kinase.
    
 0.554
AM587_10012329
Small nuclear ribonucleoprotein Sm D2.
    
 0.533
AM587_10007394
Small nuclear ribonucleoprotein G.
    
  0.531
AM587_10016918
RNA-binding protein 40.
    
 0.529
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.