STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10013588Beclin-1 protein. (519 aa)    
Predicted Functional Partners:
AM587_10010110
Phosphoinositide 3-kinase regulatory subunit.
    
 0.943
AM587_10015374
UV radiation resistance-associated protein.
    
 0.938
AM587_10016537
Phosphatidylinositol kinase (PIK-D); Belongs to the PI3/PI4-kinase family.
    
 0.882
AM587_10003935
Phosphatidyl inositol kinase (PIK-A); Belongs to the PI3/PI4-kinase family.
    
 0.882
AM587_10010491
Serine/threonine-protein kinase atg1.
    
 0.881
AM587_10007883
Serine/threonine-protein kinase ULK3.
    
 0.881
AM587_10017439
Autophagy-related protein 3.
   
 0.779
AM587_10012254
Axonemal dynein light intermediate polypeptide 1.
   
 0.771
AM587_10008065
TipD protein.
    
 0.768
AM587_10014202
Autophagy-related protein 18.
    
 0.763
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.