STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10016120Ankyrin repeat domain-containing protein 17. (409 aa)    
Predicted Functional Partners:
AM587_10011108
Serine/threonine-protein phosphatase.
    
  0.606
AM587_10016239
Lap4 protein.
    
 0.590
AM587_10009539
Intraflagellar Transport Protein 81.
    
 0.553
AM587_10005172
Intraflagellar Transport Protein 88.
    
 0.529
AM587_10006655
Intraflagellar Transport Protein 52.
    
 0.527
AM587_10013936
Intraflagellar transport protein 22.
    
  0.527
AM587_10007629
Intraflagellar Transport protein 80.
    
 0.525
AM587_10015378
Intraflagellar transport protein.
    
 0.514
AM587_10012895
Tetratricopeptide repeat protein 30A.
    
  0.508
AM587_10008868
Nitrate reductase.
    
  0.504
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.