STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10013691Peptidyl-prolyl cis-trans isomerase FKBP65. (341 aa)    
Predicted Functional Partners:
AM587_10017123
Heat shock protein 75 kDa.
   
 0.726
AM587_10004913
Heat shock protein 81-3.
   
 0.726
AM587_10008625
UbiA prenyltransferase domain-containing protein 1.
    
 0.703
AM587_10017650
Endoplasmin.
   
 0.644
AM587_10012070
Myb-like domain-containing protein.
    
 0.626
AM587_10016740
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.595
AM587_10004882
Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
   0.551
AM587_10015314
Ribosome production factor 2.
   
   0.548
AM587_10011108
Serine/threonine-protein phosphatase.
    
 0.532
AM587_10005988
Ankyrin repeat and protein kinase domain-containing protein 1.
    
 0.522
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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