STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10014987DNA mismatch repair protein MLH3. (829 aa)    
Predicted Functional Partners:
AM587_10008488
DNA mismatch repair protein Mlh1.
    
 0.989
AM587_10014713
DNA mismatch repair protein Msh2.
  
 0.906
AM587_10017735
Vacuolar protein sorting-associated protein VTA1.
    
   0.876
AM587_10013223
DNA mismatch repair protein Msh3.
  
 0.876
AM587_10007641
DNA mismatch repair protein MutS.
  
 0.860
AM587_10017616
MutS protein 4.
  
 0.860
AM587_10017617
MutS protein 4.
  
 0.860
AM587_10013625
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
    
   0.852
AM587_10012760
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.851
AM587_10009806
C2 domain-containing protein.
  
 0.851
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.