Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM587_10004907 | AM587_10007904 | A0A0W8CPZ5 | A0A0W8DE01 | Sushi. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.514 |
AM587_10004907 | AM587_10008143 | A0A0W8CPZ5 | A0A0W8BX39 | Sushi. | Counting factor associated protein D; Belongs to the peptidase C1 family. | 0.445 |
AM587_10004907 | AM587_10009920 | A0A0W8CPZ5 | A0A0W8C8G3 | Sushi. | Oryzain beta chain; Belongs to the peptidase C1 family. | 0.548 |
AM587_10004907 | AM587_10010995 | A0A0W8CPZ5 | A0A0W8C5Q9 | Sushi. | Vesicle-fusing ATPase. | 0.568 |
AM587_10004907 | AM587_10014278 | A0A0W8CPZ5 | A0A0W8DDK3 | Sushi. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.547 |
AM587_10004907 | AM587_10014600 | A0A0W8CPZ5 | A0A0W8CB48 | Sushi. | SEC13 protein; Belongs to the WD repeat SEC13 family. | 0.496 |
AM587_10004907 | AM587_10017457 | A0A0W8CPZ5 | A0A0W8CIW8 | Sushi. | Transport protein SEC13 protein; Belongs to the WD repeat SEC13 family. | 0.496 |
AM587_10004907 | AM587_10017671 | A0A0W8CPZ5 | A0A0W8AZ33 | Sushi. | Cysteine proteinase RD21a; Belongs to the peptidase C1 family. | 0.548 |
AM587_10004907 | AM587_10017723 | A0A0W8CPZ5 | A0A0W8AZ42 | Sushi. | Transport protein Sec31A protein. | 0.543 |
AM587_10007904 | AM587_10004907 | A0A0W8DE01 | A0A0W8CPZ5 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Sushi. | 0.514 |
AM587_10007904 | AM587_10008143 | A0A0W8DE01 | A0A0W8BX39 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Counting factor associated protein D; Belongs to the peptidase C1 family. | 0.499 |
AM587_10007904 | AM587_10009920 | A0A0W8DE01 | A0A0W8C8G3 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Oryzain beta chain; Belongs to the peptidase C1 family. | 0.520 |
AM587_10007904 | AM587_10010995 | A0A0W8DE01 | A0A0W8C5Q9 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Vesicle-fusing ATPase. | 0.497 |
AM587_10007904 | AM587_10014278 | A0A0W8DE01 | A0A0W8DDK3 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.441 |
AM587_10007904 | AM587_10016984 | A0A0W8DE01 | A0A0W8C800 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Proactivator polypeptide. | 0.494 |
AM587_10007904 | AM587_10017671 | A0A0W8DE01 | A0A0W8AZ33 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Cysteine proteinase RD21a; Belongs to the peptidase C1 family. | 0.520 |
AM587_10007904 | AM587_10017723 | A0A0W8DE01 | A0A0W8AZ42 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Transport protein Sec31A protein. | 0.456 |
AM587_10008143 | AM587_10004907 | A0A0W8BX39 | A0A0W8CPZ5 | Counting factor associated protein D; Belongs to the peptidase C1 family. | Sushi. | 0.445 |
AM587_10008143 | AM587_10007904 | A0A0W8BX39 | A0A0W8DE01 | Counting factor associated protein D; Belongs to the peptidase C1 family. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.499 |
AM587_10008143 | AM587_10009920 | A0A0W8BX39 | A0A0W8C8G3 | Counting factor associated protein D; Belongs to the peptidase C1 family. | Oryzain beta chain; Belongs to the peptidase C1 family. | 0.643 |
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