STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10004572Uncharacterized protein. (829 aa)    
Predicted Functional Partners:
AM587_10016239
Lap4 protein.
    
  0.642
AM587_10016473
Intersectin-2.
    
  0.621
AM587_10005206
E3 ubiquitin-protein ligase mind-bomb.
    
  0.598
AM587_10017570
Phosphatidylinositol 3.
    
  0.571
AM587_10012294
Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.562
AM587_10006443
Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.562
AM587_10001693
Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.562
AM587_10002790
Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.562
AM587_10000504
Transcription factor SKN7.
    
  0.522
AM587_10000503
Spindle assembly abnormal protein 6.
    
  0.522
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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