STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10001384CCA tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (479 aa)    
Predicted Functional Partners:
AM587_10004518
Polyribonucleotide nucleotidyltransferase.
   
 0.655
AM587_10004961
Adipocyte plasma membrane-associated protein.
    
 0.647
AM587_10006910
Gluconolactonase.
    
 0.647
AM587_10013129
Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase.
    
 0.647
AM587_10009737
Gluconolactonase.
    
 0.647
AM587_10008587
Uncharacterized protein.
    
 0.647
AM587_10016123
Exosome complex exonuclease RRP44.
  
 0.593
AM587_10009983
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.
  
 0.593
AM587_10008717
DIS3 exonuclease 2; Belongs to the RNR ribonuclease family.
  
 0.593
AM587_10000826
Exosome complex exonuclease RRP44.
  
 0.593
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.