STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10001641Uncharacterized protein. (370 aa)    
Predicted Functional Partners:
AM587_10011658
Adenylate kinase 9.
    
  0.778
AM587_10015621
Telomerase protein component 1.
    
 0.700
AM587_10008545
Retinoblastoma-binding protein 5.
    
 0.673
AM587_10016604
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.642
AM587_10007674
Uncharacterized protein.
    
 0.637
AM587_10006095
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.622
AM587_10017791
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c.
    
  0.609
AM587_10001515
39S ribosomal protein L24; Belongs to the WD repeat SEC13 family.
    
 0.604
AM587_10008079
Nuclear pore complex protein.
    
 0.594
AM587_10009057
Nucleoporin Nup43.
    
 0.592
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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