STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10013167ATP-binding Cassette (ABC) Superfamily. (1366 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.615
AM587_10017287
Ubiquitin hydrolase B; Belongs to the peptidase C19 family.
    
  0.566
AM587_10015141
ATP-sensitive inward rectifier potassium channel 11.
    
 0.545
AM587_10013308
Inward rectifier potassium channel 4.
    
 0.545
AM587_10003985
Uncharacterized protein.
    
 0.545
AM587_10006980
Uncharacterized protein.
    
 0.545
AM587_10011658
Adenylate kinase 9.
   
  0.519
AM587_10009545
Derlin-2.2.
    
  0.491
AM587_10014542
Uncharacterized protein.
    
 0.477
AM587_10006209
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.472
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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