STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10001570Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
AM587_10007951
40S ribosomal protein S30.
   
  0.857
AM587_10009831
Histone chaperone ASF1 protein.
    
 0.636
AM587_10013046
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.573
AM587_10011160
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.542
AM587_10016239
Lap4 protein.
    
 0.532
AM587_10015621
Telomerase protein component 1.
    
 0.522
AM587_10010514
Aladin.
    
  0.517
AM587_10012697
Nucleoporin GLE1.
    
  0.508
AM587_10005180
Nucleoporin GLE1.
    
  0.508
AM587_10013052
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
   0.503
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (18%) [HD]