STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10016371Uracil phosphoribosyltransferase. (502 aa)    
Predicted Functional Partners:
AM587_10005192
Hepatocyte growth factor-regulated tyrosine kinase substrate.
  
0.850
AM587_10009591
Glycogen Synthase Kinase 3 beta; Belongs to the protein kinase superfamily.
    
 0.824
AM587_10010446
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
     
 0.796
AM587_10016961
Protocadherin Fat 4.
    
 0.764
AM587_10004282
Protocadherin Fat 4.
    
 0.764
AM587_10013200
RuvB-like helicase; Belongs to the RuvB family.
    
 0.727
AM587_10014488
Orotate phosphoribosyltransferase.
    
 0.721
AM587_10008525
Armadillo repeat-containing protein 2.
    
 0.721
AM587_10013836
Orotate phosphoribosyltransferase.
    
 0.721
AM587_10011658
Adenylate kinase 9.
     
 0.713
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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