STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10010400Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
AM587_10011273
Tryptophan synthase.
    
 0.721
AM587_10011157
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.713
AM587_10013172
Plipastatin synthase subunit B.
    
 0.706
AM587_10017791
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c.
    
 0.665
AM587_10015737
N-(5'-phosphoribosyl)anthranilate isomerase.
   
 0.647
AM587_10013195
Malate synthase; Belongs to the malate synthase family.
     
 0.623
AM587_10011700
Bifunctional epoxide hydrolase 2.
   
 
0.580
AM587_10011704
Bifunctional epoxide hydrolase 2.
   
 
 0.580
AM587_10011701
Bifunctional epoxide hydrolase 2.
   
 
 0.580
AM587_10013617
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.557
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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