STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10006094Rab protein 2A. (170 aa)    
Predicted Functional Partners:
AM587_10016473
Intersectin-2.
    
 0.997
AM587_10008216
Uncharacterized protein.
    
 0.954
AM587_10009401
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.830
AM587_10017585
Serine/threonine-protein kinase.
   
 0.823
AM587_10004494
Kinesin calmodulin-binding protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.756
AM587_10016342
Rho GDP-dissociation inhibitor.
   
 0.736
AM587_10006911
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
    
 0.713
AM587_10010225
Serine/threonine-protein kinase Nek2.
    
 0.710
AM587_10004346
Exocyst complex component 6B.
    
 0.707
AM587_10016239
Lap4 protein.
    
 0.704
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.