STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10010411Patatin phospholipase domain-containing protein. (715 aa)    
Predicted Functional Partners:
AM587_10004943
Platelet-activating factor acetylhydrolase 2.
    
 0.923
AM587_10008965
Triacylglycerol lipase SDP1.
  
  
 
0.921
AM587_10005096
Phospholipid:diacylglycerol acyltransferase.
     
 0.912
AM587_10016302
Lysophosphatidylcholine acyltransferase 2B.
    
  0.909
AM587_10006348
Patatin phospholipase domain-containing protein.
  
  
 
0.907
AM587_10008272
Phosphatidylserine decarboxylase proenzyme.
    
  0.897
AM587_10016334
Neuropathy target esterase.
     
 0.896
AM587_10012198
Monoglyceride lipase.
     
 0.858
AM587_10006825
Putative abhydrolase domain-containing protein.
     
 0.858
AM587_10017407
Phospholipase YtpA.
     
 0.858
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.