STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10015688ANK_REP_REGION domain-containing protein. (293 aa)    
Predicted Functional Partners:
AM587_10008868
Nitrate reductase.
    
 0.645
AM587_10015448
Nitrate reductase; Belongs to the cytochrome b5 family.
    
 0.645
AM587_10013195
Malate synthase; Belongs to the malate synthase family.
     
 0.622
AM587_10016509
Integrator complex subunit 9.
    
 0.617
AM587_10007899
Integrator complex subunit 1.
    
 0.609
AM587_10010799
Integrator complex subunit 11.
    
 0.607
AM587_10007482
Integrator complex subunit 7.
    
 0.601
AM587_10015385
Integrator complex subunit 3.
    
 0.600
AM587_10008588
Uncharacterized protein.
    
 0.569
AM587_10011403
Integrator complex subunit 8.
    
  0.558
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.