STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10017609Diaminopimelate decarboxylase. (1224 aa)    
Predicted Functional Partners:
AM587_10012020
ATP-binding Cassette (ABC) Superfamily.
  
 
 0.735
AM587_10013264
Arginase; Belongs to the arginase family.
  
 
 0.731
AM587_10008396
Alpha-aminoadipic semialdehyde synthase.
  
 
 0.722
AM587_10010864
Argininosuccinate synthase.
  
 
 0.709
AM587_10016035
Aspartate aminotransferase.
     
 0.686
AM587_10008641
Argininosuccinate lyase.
  
 
 0.684
AM587_10007781
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family.
  
 0.683
AM587_10000870
Spermidine synthase 2; Belongs to the spermidine/spermine synthase family.
  
 0.683
AM587_10015453
Diacylglycerol O-acyltransferase 2 protein 6.
  
 0.683
AM587_10008652
Biotin synthase.
    
 0.670
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.