STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10006616Multidrug and toxin extrusion protein 1. (599 aa)    
Predicted Functional Partners:
AM587_10017113
3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.634
AM587_10016930
NADH dehydrogenase (Ubiquinone) complex I.
   
 
 0.587
AM587_10016807
RRP5 protein.
   
    0.483
AM587_10011820
Ribonucleases P/MRP protein subunit POP1.
   
 
 0.468
AM587_10017732
tRNA (Guanine(9)-N1)-methyltransferase.
   
 0.457
AM587_10007503
tRNA methyltransferase 10 A.
   
 0.457
AM587_10008762
tRNA methyltransferase 10 A.
   
 0.457
AM587_10010813
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
     
 0.455
AM587_10013706
60S ribosomal protein L5.
     
 0.445
AM587_10000138
Cyclin N-terminal domain-containing protein.
   
    0.434
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.