STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10010909Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
AM587_10005909
Fanconi anemia group M protein.
    
 0.706
AM587_10013874
DNA polymerase delta small subunit.
    
 0.697
AM587_10008327
SMN domain-containing protein.
    
 0.684
AM587_10015287
DNA polymerase.
    
 0.673
AM587_10015621
Telomerase protein component 1.
    
 0.653
AM587_10013336
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.646
AM587_10011112
ATP-dependent RNA helicase DDX20.
    
 0.643
AM587_10012329
Small nuclear ribonucleoprotein Sm D2.
    
 0.622
AM587_10004073
Crossover junction endonuclease MUS81.
    
 0.615
AM587_10007394
Small nuclear ribonucleoprotein G.
    
  0.615
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.