STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10011592Trans-1. (355 aa)    
Predicted Functional Partners:
AM587_10001564
Xylose isomerase.
    
 0.921
AM587_10015723
Bifunctional protein GAL10.
  
 
 0.830
AM587_10011590
Trans-1.
  
  
 
0.829
AM587_10011589
Trans-1.
  
  
 
0.829
AM587_10010940
Nicotinamide mononucleotide adenylyltransferase 2.
     
 0.619
AM587_10013447
CbiX domain-containing protein.
  
 
 0.608
AM587_10002223
CbiX domain-containing protein.
  
 
 0.608
AM587_10007969
Rhamnose biosynthetic enzyme 2.
  
 
 0.608
AM587_10001749
Inositol monophosphatase 1.
    
 0.603
AM587_10012020
ATP-binding Cassette (ABC) Superfamily.
   
 
  0.596
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.