STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10016378Long chain acyl-CoA synthetase 7. (700 aa)    
Predicted Functional Partners:
AM587_10008248
Carnitine O-palmitoyltransferase 1; Belongs to the carnitine/choline acetyltransferase family.
     
 0.934
AM587_10006635
Palmitoyl-protein thioesterase 1.
     
 0.903
AM587_10011759
Lysosomal thioesterase PPT2-B.
     
 0.873
AM587_10014175
Tetratricopeptide repeat protein 6.
     
 0.873
AM587_10015486
Long-chain-fatty-acid--CoA ligase ACSBG2.
  
  
 
0.849
AM587_10006383
Lysosomal thioesterase PPT2-B.
     
 0.844
AM587_10008965
Triacylglycerol lipase SDP1.
     
 0.841
AM587_10016244
Long-chain-fatty-acid--CoA ligase ACSBG2.
  
  
 
0.829
AM587_10006381
Lysosomal thioesterase PPT2-B.
     
 0.828
AM587_10005350
Long-chain-fatty-acid--CoA ligase ACSBG2.
  
  
 
0.788
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.