STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10012689Phospholipase A-2-activating protein. (755 aa)    
Predicted Functional Partners:
AM587_10012843
UBA and UBX domain-containing protein.
    
 
 0.976
AM587_10006727
Ubiquitin thioesterase OTU1.
    
 
 0.976
AM587_10011842
NPL4 protein.
   
 
 0.975
AM587_10005028
FAS-associated factor 2-B.
   
 
 0.944
AM587_10000046
Ubiquitin fusion degradation protein 1.
   
 
 0.866
AM587_10012748
Ubiquitin fusion degradation protein 1.
   
 
 0.866
AM587_10007231
Ubiquitin fusion degradation protein 1.
   
 
 0.866
AM587_10003014
Ubiquitin fusion degradation protein 1.
   
 
 0.866
AM587_10012639
ATPase.
   
 
 0.748
AM587_10004877
SAV protein.
   
 
 0.748
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.