STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10000003Multifunctional methyltransferase subunit trm112. (138 aa)    
Predicted Functional Partners:
AM587_10013700
HemK methyltransferase family member 2.
    
 0.968
AM587_10006814
tRNA (Guanine(10)-N2)-methyltransferase.
   
 0.955
AM587_10008321
Williams-Beuren syndrome chromosomal region 22 protein.
   
 0.938
AM587_10016071
Methyltransferase WBSCR22.
   
 0.938
AM587_10007951
40S ribosomal protein S30.
   
  0.926
AM587_10004060
Release factor glutamine methyltransferase.
    
 0.900
AM587_10007775
Release factor glutamine methyltransferase.
    
 0.900
AM587_10016823
MTS domain-containing protein.
    
 
 0.890
AM587_10011536
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
 
 0.863
AM587_10007875
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.829
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.