STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10012746Vacuolar amino acid transporter 3. (531 aa)    
Predicted Functional Partners:
AM587_10013620
Ras-related GTP-binding protein A.
   
 0.586
AM587_10012013
Ras-related GTP-binding protein C.
    
 0.579
AM587_10014988
TRAF-type zinc finger domain-containing protein 1.
    
  0.470
AM587_10006700
Uncharacterized protein.
    
  0.470
AM587_10006155
H-or Na-translocating F-type.
    
  0.460
AM587_10011373
5'-AMP-activated protein kinase subunit beta-2.
    
  0.421
AM587_10011725
Regulatory-associated protein of mTOR.
     
 0.400
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.