STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10010511Pseudouridine-metabolizing bifunctional protein. (710 aa)    
Predicted Functional Partners:
AM587_10013807
Purine nucleoside phosphorylase.
  
 
  0.840
AM587_10010817
Purine nucleoside phosphorylase.
  
 
  0.840
AM587_10014861
Uridine phosphorylase 1.
    
  0.832
AM587_10014862
PPM-type phosphatase domain-containing protein.
    
  0.830
AM587_10010830
GRIP domain-containing protein.
  
 
  0.808
AM587_10006908
Uridine nucleosidase 2.
 
 
  0.732
AM587_10015357
Adenosine kinase.
  
 
 0.706
AM587_10012493
Adenosine kinase.
  
 
 0.706
AM587_10017080
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.706
AM587_10011087
Ribokinase.
  
 
 0.706
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.