STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AM587_10007314Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
AM587_10014978
Chromatin modification-related protein MEAF6.
    
 0.663
AM587_10017243
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.657
AM587_10016723
Transcription initiation factor TFIID subunit 6.
    
 0.579
AM587_10010430
DNA methyltransferase 1-associated protein 1.
    
 0.484
AM587_10004145
Enhancer of polycomb-like protein.
    
 0.480
AM587_10016579
Phosphatidylinositol kinase (PIK-L3); Belongs to the PI3/PI4-kinase family.
   
 0.449
AM587_10015874
Phosphatidylinositol kinase (PIK-L3); Belongs to the PI3/PI4-kinase family.
   
 0.449
AM587_10007407
Transcription initiation factor TFIID subunit 2.
    
 0.442
AM587_10005247
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.437
AM587_10010462
Transcription initiation factor TFIID subunit 10.
    
 0.435
Your Current Organism:
Phytophthora nicotianae
NCBI taxonomy Id: 4790
Other names: P. nicotianae, buckeye rot agent
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